Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.67■□□□□ 0.26
CD58P19256 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD58P19256 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 AC023824.1-201ENST00000562945 2975 ntBASIC16.66■□□□□ 0.26
CD58P19256 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CD58P19256 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.66■□□□□ 0.26
CD58P19256 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.66■□□□□ 0.26
CD58P19256 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 AC055876.2-201ENST00000531834 546 ntBASIC16.66■□□□□ 0.26
CD58P19256 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.66■□□□□ 0.26
CD58P19256 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 AC138035.3-201ENST00000622706 2791 ntBASIC16.66■□□□□ 0.26
CD58P19256 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CD58P19256 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD58P19256 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.66■□□□□ 0.26
CD58P19256 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CD58P19256 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 MEP1AP4-201ENST00000423244 1087 ntBASIC16.65■□□□□ 0.26
CD58P19256 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 DFFBP1-201ENST00000433250 979 ntBASIC16.65■□□□□ 0.26
CD58P19256 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.65■□□□□ 0.26
CD58P19256 FAM86LP-201ENST00000478302 853 ntBASIC16.65■□□□□ 0.26
CD58P19256 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
CD58P19256 AC190387.1-201ENST00000551683 408 ntBASIC16.65■□□□□ 0.26
CD58P19256 CHCHD2P3-201ENST00000603038 451 ntBASIC16.65■□□□□ 0.26
CD58P19256 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
CD58P19256 MIR8072-201ENST00000614241 80 ntBASIC16.65■□□□□ 0.26
CD58P19256 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.65■□□□□ 0.26
CD58P19256 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 CICP11-201ENST00000434745 2827 ntBASIC16.65■□□□□ 0.26
CD58P19256 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.65■□□□□ 0.26
CD58P19256 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
CD58P19256 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CD58P19256 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD58P19256 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.64■□□□□ 0.26
CD58P19256 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.64■□□□□ 0.26
CD58P19256 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CD58P19256 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.64■□□□□ 0.25
CD58P19256 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CD58P19256 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms