Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 AL513190.1-201ENST00000621254 727 ntBASIC15.62■□□□□ 0.09
KRT4P19013 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
KRT4P19013 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
KRT4P19013 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 AC097359.2-201ENST00000604992 2389 ntBASIC15.62■□□□□ 0.09
KRT4P19013 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
KRT4P19013 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT4P19013 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
KRT4P19013 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
KRT4P19013 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT4P19013 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.61■□□□□ 0.09
KRT4P19013 AC104109.2-201ENST00000602919 1418 ntBASIC15.61■□□□□ 0.09
KRT4P19013 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 AP000845.1-201ENST00000581677 2131 ntBASIC15.61■□□□□ 0.09
KRT4P19013 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.61■□□□□ 0.09
KRT4P19013 HLA-H-201ENST00000383620 1096 ntBASIC15.61■□□□□ 0.09
KRT4P19013 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 AC007967.2-201ENST00000432613 625 ntBASIC15.61■□□□□ 0.09
KRT4P19013 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 FAAHP1-202ENST00000446499 1238 ntBASIC15.61■□□□□ 0.09
KRT4P19013 AC034105.1-201ENST00000563488 319 ntBASIC15.61■□□□□ 0.09
KRT4P19013 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KRT4P19013 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.61■□□□□ 0.09
KRT4P19013 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.61■□□□□ 0.09
KRT4P19013 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
KRT4P19013 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.6■□□□□ 0.09
KRT4P19013 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 AZGP1P1-201ENST00000411909 902 ntBASIC15.6■□□□□ 0.09
KRT4P19013 TFAMP1-201ENST00000412727 736 ntBASIC15.6■□□□□ 0.09
KRT4P19013 AL355306.1-201ENST00000415580 579 ntBASIC15.6■□□□□ 0.09
KRT4P19013 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.6■□□□□ 0.09
KRT4P19013 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.6■□□□□ 0.09
KRT4P19013 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KRT4P19013 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.6■□□□□ 0.09
KRT4P19013 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms