Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 NORAD-201ENST00000565493 5339 ntBASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AL009178.2-201ENST00000597278 2719 ntBASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AC020658.6-201ENST00000623564 1870 ntBASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AL109954.1-202ENST00000564051 2148 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 TARDBPP1-201ENST00000442013 1203 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC036164.1-201ENST00000570544 333 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 IGHV3-72-202ENST00000621503 303 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 CLK3P2-201ENST00000427566 1453 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 SNX18-202ENST00000343017 3140 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 CICP24-201ENST00000605464 2705 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC138035.3-201ENST00000622706 2791 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 AC134407.2-201ENST00000625089 1978 ntBASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
TMIGD3P0DMS9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.08□□□□□ -0.15
TMIGD3P0DMS9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMIGD3P0DMS9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 GPR53P-205ENST00000457298 1084 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 PHKG1P2-201ENST00000457537 863 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 AC132938.2-201ENST00000579188 680 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 AL450472.2-201ENST00000603663 1156 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 AL591163.1-201ENST00000641757 987 ntBASIC14.08□□□□□ -0.16
TMIGD3P0DMS9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms