Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN1P07384 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 AC091951.1-201ENST00000512854 2465 ntBASIC15.34■□□□□ 0.05
CAPN1P07384 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN1P07384 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN1P07384 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CAPN1P07384 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CAPN1P07384 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CAPN1P07384 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.33■□□□□ 0.04
CAPN1P07384 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.33■□□□□ 0.04
CAPN1P07384 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 HNRNPUP1-201ENST00000554987 333 ntBASIC15.33■□□□□ 0.04
CAPN1P07384 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 SPDYE22P-201ENST00000582158 798 ntBASIC15.33■□□□□ 0.04
CAPN1P07384 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.33■□□□□ 0.04
CAPN1P07384 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CAPN1P07384 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN1P07384 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CAPN1P07384 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN1P07384 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN1P07384 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN1P07384 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN1P07384 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms