Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHGBP05060 ANKRD19P-201ENST00000338192 862 ntBASIC18.53■□□□□ 0.56
CHGBP05060 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHGBP05060 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.53■□□□□ 0.56
CHGBP05060 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 ACTG1P3-201ENST00000431775 1114 ntBASIC18.53■□□□□ 0.56
CHGBP05060 AL162726.2-201ENST00000438986 1017 ntBASIC18.53■□□□□ 0.56
CHGBP05060 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 RPL13AP25-201ENST00000484130 612 ntBASIC18.53■□□□□ 0.56
CHGBP05060 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.53■□□□□ 0.56
CHGBP05060 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.53■□□□□ 0.56
CHGBP05060 AP001889.1-201ENST00000525414 633 ntBASIC18.53■□□□□ 0.56
CHGBP05060 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.53■□□□□ 0.56
CHGBP05060 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.53■□□□□ 0.56
CHGBP05060 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.53■□□□□ 0.56
CHGBP05060 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHGBP05060 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHGBP05060 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 AC104457.1-201ENST00000401024 814 ntBASIC18.52■□□□□ 0.56
CHGBP05060 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 HLA-K-203ENST00000430151 1046 ntBASIC18.52■□□□□ 0.56
CHGBP05060 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.52■□□□□ 0.56
CHGBP05060 BCRP2-202ENST00000447763 634 ntBASIC18.52■□□□□ 0.56
CHGBP05060 AC007389.4-201ENST00000454674 793 ntBASIC18.52■□□□□ 0.56
CHGBP05060 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.52■□□□□ 0.56
CHGBP05060 BCRP6-201ENST00000510112 632 ntBASIC18.52■□□□□ 0.56
CHGBP05060 BCRP7-201ENST00000511549 544 ntBASIC18.52■□□□□ 0.56
CHGBP05060 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.52■□□□□ 0.56
CHGBP05060 SLC25A47P1-201ENST00000531577 414 ntBASIC18.52■□□□□ 0.56
CHGBP05060 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.52■□□□□ 0.56
CHGBP05060 AC093813.1-201ENST00000605066 256 ntBASIC18.52■□□□□ 0.56
CHGBP05060 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHGBP05060 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHGBP05060 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CHGBP05060 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.52■□□□□ 0.55
CHGBP05060 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.52■□□□□ 0.55
CHGBP05060 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CHGBP05060 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CHGBP05060 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CHGBP05060 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHGBP05060 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHGBP05060 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHGBP05060 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.51■□□□□ 0.55
CHGBP05060 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
CHGBP05060 AC011495.1-201ENST00000498085 584 ntBASIC18.51■□□□□ 0.55
CHGBP05060 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms