Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC011247.3-201ENST00000603297 438 ntBASIC9.36□□□□□ -0.91
APOBP04114 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 AR-207ENST00000612010 3896 ntTSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC9.36□□□□□ -0.91
APOBP04114 RPL7P35-201ENST00000446943 740 ntBASIC9.36□□□□□ -0.91
APOBP04114 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC9.36□□□□□ -0.91
APOBP04114 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 NUDT4P2-201ENST00000578341 546 ntBASIC9.36□□□□□ -0.91
APOBP04114 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 AL136295.7-201ENST00000619226 1200 ntBASIC9.36□□□□□ -0.91
APOBP04114 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
APOBP04114 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
APOBP04114 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 FTH1P22-201ENST00000456305 520 ntBASIC9.36□□□□□ -0.91
APOBP04114 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
APOBP04114 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
APOBP04114 TP53-221ENST00000615910 1149 ntTSL 5 BASIC9.36□□□□□ -0.91
APOBP04114 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC9.36□□□□□ -0.91
APOBP04114 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
APOBP04114 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 REXO1L4P-201ENST00000605109 1937 ntBASIC9.35□□□□□ -0.91
APOBP04114 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC9.35□□□□□ -0.91
APOBP04114 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC9.35□□□□□ -0.91
APOBP04114 AC024293.1-201ENST00000467930 498 ntBASIC9.35□□□□□ -0.91
APOBP04114 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC9.35□□□□□ -0.91
APOBP04114 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 AC013726.1-201ENST00000563747 2285 ntBASIC9.35□□□□□ -0.91
APOBP04114 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 STK26-204ENST00000481105 1835 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 AC106047.2-201ENST00000511723 743 ntBASIC9.35□□□□□ -0.91
APOBP04114 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC9.35□□□□□ -0.91
APOBP04114 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC9.35□□□□□ -0.91
APOBP04114 NAT9-220ENST00000582870 896 ntTSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 AL451007.2-201ENST00000632004 563 ntBASIC9.35□□□□□ -0.91
APOBP04114 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 ENPP7P8-202ENST00000527856 1345 ntBASIC9.35□□□□□ -0.91
APOBP04114 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 STK16-203ENST00000409516 895 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC9.35□□□□□ -0.91
APOBP04114 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC9.35□□□□□ -0.91
APOBP04114 AP000358.1-201ENST00000456260 156 ntBASIC9.35□□□□□ -0.91
APOBP04114 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC9.35□□□□□ -0.91
APOBP04114 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC9.35□□□□□ -0.91
APOBP04114 AL627230.2-201ENST00000613254 655 ntBASIC9.35□□□□□ -0.91
APOBP04114 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.35□□□□□ -0.91
APOBP04114 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
APOBP04114 FRMPD2B-201ENST00000431305 1347 ntBASIC9.35□□□□□ -0.91
APOBP04114 AL360270.3-201ENST00000609118 1348 ntBASIC9.35□□□□□ -0.91
APOBP04114 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
APOBP04114 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
APOBP04114 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
APOBP04114 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 AC012441.2-201ENST00000444843 739 ntBASIC9.34□□□□□ -0.91
APOBP04114 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC9.34□□□□□ -0.91
APOBP04114 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC9.34□□□□□ -0.91
APOBP04114 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms