Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 KRT8P4-201ENST00000509735 1454 ntBASIC16.7■□□□□ 0.26
CHRNA1P02708 AC104457.1-201ENST00000401024 814 ntBASIC16.7■□□□□ 0.26
CHRNA1P02708 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CHRNA1P02708 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.7■□□□□ 0.26
CHRNA1P02708 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA1P02708 AC126915.1-201ENST00000522847 1038 ntBASIC16.7■□□□□ 0.26
CHRNA1P02708 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 AC020914.3-201ENST00000594712 304 ntBASIC16.7■□□□□ 0.26
CHRNA1P02708 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA1P02708 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA1P02708 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CHRNA1P02708 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA1P02708 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.69■□□□□ 0.26
CHRNA1P02708 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA1P02708 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA1P02708 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC106820.3-201ENST00000561653 397 ntBASIC16.69■□□□□ 0.26
CHRNA1P02708 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA1P02708 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA1P02708 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 REXO1L5P-201ENST00000622260 2098 ntBASIC16.69■□□□□ 0.26
CHRNA1P02708 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHRNA1P02708 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA1P02708 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC055811.4-201ENST00000624039 1754 ntBASIC16.69■□□□□ 0.26
CHRNA1P02708 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA1P02708 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA1P02708 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA1P02708 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.68■□□□□ 0.26
CHRNA1P02708 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 RPL5P21-201ENST00000404620 815 ntBASIC16.68■□□□□ 0.26
CHRNA1P02708 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHRNA1P02708 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHRNA1P02708 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms