Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 AC026954.1-201ENST00000429771 1293 ntBASIC15.08■□□□□ 0
TNFP01375 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.08■□□□□ 0
TNFP01375 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.08■□□□□ 0
TNFP01375 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.08■□□□□ 0
TNFP01375 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.08■□□□□ 0
TNFP01375 SAMD11P1-201ENST00000571429 661 ntBASIC15.08■□□□□ 0
TNFP01375 AC010328.2-201ENST00000597698 1111 ntBASIC15.08■□□□□ 0
TNFP01375 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.08■□□□□ 0
TNFP01375 PRSS30P-206ENST00000641773 873 ntBASIC15.08■□□□□ 0
TNFP01375 CICP13-201ENST00000422015 2789 ntBASIC15.08■□□□□ 0
TNFP01375 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TNFP01375 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TNFP01375 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.08■□□□□ 0
TNFP01375 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.08■□□□□ 0
TNFP01375 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.08■□□□□ 0
TNFP01375 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.08■□□□□ 0
TNFP01375 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TNFP01375 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.08■□□□□ 0
TNFP01375 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TNFP01375 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.08■□□□□ 0
TNFP01375 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TNFP01375 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TNFP01375 AC026691.1-201ENST00000602502 2017 ntBASIC15.07■□□□□ 0
TNFP01375 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TNFP01375 AL138709.1-201ENST00000614840 1693 ntBASIC15.07■□□□□ 0
TNFP01375 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.07■□□□□ 0
TNFP01375 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TNFP01375 BRWD1P1-201ENST00000401091 371 ntBASIC15.07■□□□□ 0
TNFP01375 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 FAM197Y7-201ENST00000432892 766 ntBASIC15.07■□□□□ 0
TNFP01375 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.07■□□□□ 0
TNFP01375 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 AL355994.2-201ENST00000447882 704 ntBASIC15.07■□□□□ 0
TNFP01375 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.07■□□□□ 0
TNFP01375 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.07■□□□□ 0
TNFP01375 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.07■□□□□ 0
TNFP01375 RN7SL219P-201ENST00000582872 296 ntBASIC15.07■□□□□ 0
TNFP01375 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.07■□□□□ 0
TNFP01375 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 AC008687.7-202ENST00000637404 953 ntBASIC15.07■□□□□ 0
TNFP01375 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.07■□□□□ 0
TNFP01375 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 TUBB1P2-201ENST00000422712 1306 ntBASIC15.07■□□□□ 0
TNFP01375 TUBB1P1-201ENST00000503144 1300 ntBASIC15.07■□□□□ 0
TNFP01375 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
TNFP01375 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TNFP01375 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.07■□□□□ 0
TNFP01375 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TNFP01375 AL158070.2-201ENST00000623713 1621 ntBASIC15.06■□□□□ 0
TNFP01375 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TNFP01375 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TNFP01375 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TNFP01375 AC006001.1-201ENST00000325130 474 ntBASIC15.06■□□□□ 0
TNFP01375 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TNFP01375 AL139094.1-201ENST00000405549 1188 ntBASIC15.06■□□□□ 0
TNFP01375 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.06■□□□□ 0
TNFP01375 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.06■□□□□ 0
TNFP01375 RNA5SP486-201ENST00000515961 83 ntBASIC15.06■□□□□ 0
TNFP01375 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms