Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PAUPAR-201ENST00000630360 2965 ntBASIC17.34■□□□□ 0.37
GGPS1O95749 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.34■□□□□ 0.37
GGPS1O95749 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
GGPS1O95749 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.34■□□□□ 0.37
GGPS1O95749 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GGPS1O95749 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GGPS1O95749 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 PRAL-201ENST00000624952 3286 ntBASIC17.33■□□□□ 0.37
GGPS1O95749 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.33■□□□□ 0.37
GGPS1O95749 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GGPS1O95749 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.33■□□□□ 0.36
GGPS1O95749 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 AC078819.1-201ENST00000547454 765 ntBASIC17.33■□□□□ 0.36
GGPS1O95749 AC012085.1-201ENST00000548270 765 ntBASIC17.33■□□□□ 0.36
GGPS1O95749 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.33■□□□□ 0.36
GGPS1O95749 MIR4525-201ENST00000580000 75 ntBASIC17.33■□□□□ 0.36
GGPS1O95749 AC010328.2-201ENST00000597698 1111 ntBASIC17.33■□□□□ 0.36
GGPS1O95749 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GGPS1O95749 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GGPS1O95749 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GGPS1O95749 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 BRWD1P1-201ENST00000401091 371 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GGPS1O95749 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.32■□□□□ 0.36
GGPS1O95749 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.32■□□□□ 0.36
GGPS1O95749 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 AC009542.2-202ENST00000619004 1067 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 AC008687.7-202ENST00000637404 953 ntBASIC17.32■□□□□ 0.36
GGPS1O95749 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GGPS1O95749 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms