Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.05□□□□□ -0.32
SIX6O95475 NKAPP1-205ENST00000585790 367 ntBASIC13.05□□□□□ -0.32
SIX6O95475 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.05□□□□□ -0.32
SIX6O95475 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 AC129492.6-201ENST00000611383 1305 ntBASIC13.05□□□□□ -0.32
SIX6O95475 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.05□□□□□ -0.32
SIX6O95475 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SIX6O95475 AP005117.1-201ENST00000584346 1413 ntBASIC13.05□□□□□ -0.32
SIX6O95475 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 AC019294.4-201ENST00000561777 2905 ntBASIC13.04□□□□□ -0.32
SIX6O95475 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 AC091076.1-201ENST00000610741 619 ntBASIC13.04□□□□□ -0.32
SIX6O95475 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 CICP11-201ENST00000434745 2827 ntBASIC13.04□□□□□ -0.32
SIX6O95475 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 KRT18P1-202ENST00000452408 1331 ntBASIC13.04□□□□□ -0.32
SIX6O95475 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.04□□□□□ -0.32
SIX6O95475 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.04□□□□□ -0.32
SIX6O95475 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.04□□□□□ -0.32
SIX6O95475 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SIX6O95475 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.04□□□□□ -0.32
SIX6O95475 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.04□□□□□ -0.32
SIX6O95475 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 IGHV3-47-201ENST00000425060 335 ntBASIC13.03□□□□□ -0.32
SIX6O95475 GPX1P2-201ENST00000429271 606 ntBASIC13.03□□□□□ -0.32
SIX6O95475 BX276092.5-203ENST00000456199 560 ntBASIC13.03□□□□□ -0.32
SIX6O95475 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.03□□□□□ -0.32
SIX6O95475 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
SIX6O95475 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 AP001269.4-201ENST00000609611 512 ntBASIC13.03□□□□□ -0.32
SIX6O95475 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.03□□□□□ -0.32
SIX6O95475 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SIX6O95475 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SIX6O95475 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms