Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 FGFR3P6-201ENST00000457012 610 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 INGX-202ENST00000489074 768 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC136632.2-201ENST00000512891 861 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 IGHV3-65-201ENST00000523210 341 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC025062.2-201ENST00000605477 670 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AL078644.1-201ENST00000609881 752 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 MTHFR-210ENST00000641407 2387 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 AC113367.3-201ENST00000508316 1912 ntBASIC11.33□□□□□ -0.6
TNFRSF6BO95407 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TNFRSF6BO95407 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AL359881.3-201ENST00000602640 1721 ntBASIC11.32□□□□□ -0.6
TNFRSF6BO95407 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AC093827.2-201ENST00000512654 315 ntBASIC11.32□□□□□ -0.6
TNFRSF6BO95407 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AC107918.4-202ENST00000641623 219 ntBASIC11.32□□□□□ -0.6
TNFRSF6BO95407 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AC092135.3-201ENST00000624151 1846 ntBASIC11.32□□□□□ -0.6
TNFRSF6BO95407 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TNFRSF6BO95407 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TNFRSF6BO95407 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TNFRSF6BO95407 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms