Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 AC073389.1-201ENST00000595595 795 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.18□□□□□ -0.46
ZNF253O75346 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF253O75346 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AC134407.2-201ENST00000625089 1978 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 BEND3P1-201ENST00000421591 1944 ntBASIC12.17□□□□□ -0.46
ZNF253O75346 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF253O75346 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF253O75346 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 AC098859.1-201ENST00000502915 1238 ntBASIC12.17□□□□□ -0.46
ZNF253O75346 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.17□□□□□ -0.46
ZNF253O75346 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF253O75346 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF253O75346 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF253O75346 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 AC091951.1-201ENST00000512854 2465 ntBASIC12.17□□□□□ -0.46
ZNF253O75346 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF253O75346 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF253O75346 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.16□□□□□ -0.46
ZNF253O75346 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF253O75346 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
ZNF253O75346 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF253O75346 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms