Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
PDCD6O75340 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.14□□□□□ -0.31
PDCD6O75340 AC005829.1-201ENST00000570002 483 ntBASIC13.14□□□□□ -0.31
PDCD6O75340 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 AL133215.2-201ENST00000609242 977 ntBASIC13.14□□□□□ -0.31
PDCD6O75340 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.14□□□□□ -0.31
PDCD6O75340 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDCD6O75340 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 LINC00552-201ENST00000625151 2579 ntBASIC13.14□□□□□ -0.31
PDCD6O75340 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PDCD6O75340 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
PDCD6O75340 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PDCD6O75340 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 AC023908.3-201ENST00000564211 3047 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 RBPMS2P1-201ENST00000437762 623 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 MTND6P24-201ENST00000440466 518 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 DNAJB3-201ENST00000446806 729 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.13□□□□□ -0.31
PDCD6O75340 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.13□□□□□ -0.31
PDCD6O75340 SLED1-202ENST00000512051 380 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.13□□□□□ -0.31
PDCD6O75340 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.13□□□□□ -0.31
PDCD6O75340 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.13□□□□□ -0.31
PDCD6O75340 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 AC067750.1-201ENST00000608826 6545 ntBASIC13.13□□□□□ -0.31
PDCD6O75340 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.13□□□□□ -0.31
PDCD6O75340 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PDCD6O75340 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PDCD6O75340 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PDCD6O75340 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms