Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 FAM8A4P-201ENST00000435433 1213 ntBASIC18■□□□□ 0.47
CTNND1O60716 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 HSPB1P2-201ENST00000448722 546 ntBASIC18■□□□□ 0.47
CTNND1O60716 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18■□□□□ 0.47
CTNND1O60716 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CTNND1O60716 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTNND1O60716 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTNND1O60716 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
CTNND1O60716 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 PCDHA1-201ENST00000378133 2726 ntBASIC17.99■□□□□ 0.47
CTNND1O60716 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.99■□□□□ 0.47
CTNND1O60716 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.99■□□□□ 0.47
CTNND1O60716 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CTNND1O60716 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 AC079178.1-201ENST00000420915 656 ntBASIC17.99■□□□□ 0.47
CTNND1O60716 IGHJ2P-201ENST00000454480 60 ntBASIC17.99■□□□□ 0.47
CTNND1O60716 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.99■□□□□ 0.47
CTNND1O60716 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.99■□□□□ 0.47
CTNND1O60716 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.99■□□□□ 0.47
CTNND1O60716 AC020914.3-201ENST00000594712 304 ntBASIC17.99■□□□□ 0.47
CTNND1O60716 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.99■□□□□ 0.47
CTNND1O60716 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CTNND1O60716 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTNND1O60716 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 AC004945.1-201ENST00000416738 983 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 FNTAP2-201ENST00000430308 634 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 EIF3FP3-201ENST00000434851 1086 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 COX5BP1-201ENST00000507622 393 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 RHOQP1-201ENST00000555758 579 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 ACTG1P17-201ENST00000558391 1119 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 AC106872.11-201ENST00000605838 421 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 AC244157.2-201ENST00000616239 1006 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.98■□□□□ 0.47
CTNND1O60716 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.98■□□□□ 0.47
CTNND1O60716 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.98■□□□□ 0.47
CTNND1O60716 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.98■□□□□ 0.47
CTNND1O60716 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTNND1O60716 AC079328.2-201ENST00000561241 3354 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms