Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.9□□□□□ -0.19
ZIC3O60481 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.19
ZIC3O60481 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 PPT1-215ENST00000641471 2368 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
ZIC3O60481 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 AC005229.1-201ENST00000392885 409 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 GHSR-202ENST00000427970 912 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 AC114812.1-204ENST00000449669 728 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC3O60481 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.89□□□□□ -0.19
ZIC3O60481 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.89□□□□□ -0.19
ZIC3O60481 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 AC233724.13-201ENST00000598383 410 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 AC126365.1-201ENST00000578585 1514 ntBASIC13.89□□□□□ -0.19
ZIC3O60481 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZIC3O60481 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.89□□□□□ -0.19
ZIC3O60481 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ZIC3O60481 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.88□□□□□ -0.19
ZIC3O60481 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
ZIC3O60481 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.88□□□□□ -0.19
ZIC3O60481 AC079776.1-201ENST00000401540 1152 ntBASIC13.88□□□□□ -0.19
ZIC3O60481 AC112492.5-201ENST00000421897 457 ntBASIC13.88□□□□□ -0.19
ZIC3O60481 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 KRT17P8-201ENST00000540749 863 ntBASIC13.88□□□□□ -0.19
ZIC3O60481 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.88□□□□□ -0.19
ZIC3O60481 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms