Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01711-201ENST00000598340 967 ntBASIC12.72□□□□□ -0.37
SSSCA1O60232 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SSSCA1O60232 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SSSCA1O60232 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.72□□□□□ -0.37
SSSCA1O60232 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SSSCA1O60232 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SSSCA1O60232 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSSCA1O60232 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.72□□□□□ -0.37
SSSCA1O60232 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
SSSCA1O60232 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 AC004987.2-201ENST00000395959 1148 ntBASIC12.71□□□□□ -0.37
SSSCA1O60232 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 AF238378.1-201ENST00000526806 358 ntBASIC12.71□□□□□ -0.37
SSSCA1O60232 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.71□□□□□ -0.37
SSSCA1O60232 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.71□□□□□ -0.37
SSSCA1O60232 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.71□□□□□ -0.37
SSSCA1O60232 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSSCA1O60232 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.71□□□□□ -0.37
SSSCA1O60232 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSSCA1O60232 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSSCA1O60232 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
SSSCA1O60232 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSSCA1O60232 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSSCA1O60232 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
SSSCA1O60232 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
SSSCA1O60232 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSSCA1O60232 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.7□□□□□ -0.38
SSSCA1O60232 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.7□□□□□ -0.38
SSSCA1O60232 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 MTHFR-210ENST00000641407 2387 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SSSCA1O60232 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms