Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TSSC2-201ENST00000450217 709 ntBASIC12.08□□□□□ -0.48
PDE6DO43924 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.08□□□□□ -0.48
PDE6DO43924 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.08□□□□□ -0.48
PDE6DO43924 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
PDE6DO43924 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.08□□□□□ -0.48
PDE6DO43924 BNIP3P1-202ENST00000550043 1585 ntBASIC12.08□□□□□ -0.48
PDE6DO43924 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 AC006504.4-201ENST00000592118 1568 ntBASIC12.08□□□□□ -0.48
PDE6DO43924 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 PMS2P7-201ENST00000506558 1336 ntBASIC12.08□□□□□ -0.48
PDE6DO43924 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.08□□□□□ -0.48
PDE6DO43924 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PDE6DO43924 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
PDE6DO43924 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CICP20-201ENST00000443330 2801 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
PDE6DO43924 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 NUS1P2-201ENST00000417358 873 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.07□□□□□ -0.48
PDE6DO43924 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.07□□□□□ -0.48
PDE6DO43924 RPS15P9-201ENST00000494093 319 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
PDE6DO43924 AC006557.2-201ENST00000592985 1240 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 AL691432.1-201ENST00000596308 1422 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 CICP8-201ENST00000455800 2813 ntBASIC12.07□□□□□ -0.48
PDE6DO43924 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.07□□□□□ -0.48
PDE6DO43924 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
PDE6DO43924 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PDE6DO43924 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.07□□□□□ -0.48
PDE6DO43924 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PDE6DO43924 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PDE6DO43924 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PDE6DO43924 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PDE6DO43924 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.06□□□□□ -0.48
PDE6DO43924 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PDE6DO43924 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PDE6DO43924 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms