Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF113AO15541 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF113AO15541 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.52■□□□□ 0.56
RNF113AO15541 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
RNF113AO15541 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF113AO15541 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 ACKR1-201ENST00000368121 1240 ntBASIC18.52■□□□□ 0.56
RNF113AO15541 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF113AO15541 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF113AO15541 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF113AO15541 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF113AO15541 PRSS30P-206ENST00000641773 873 ntBASIC18.52■□□□□ 0.56
RNF113AO15541 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF113AO15541 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF113AO15541 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF113AO15541 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RNF113AO15541 AL158070.2-201ENST00000623713 1621 ntBASIC18.52■□□□□ 0.55
RNF113AO15541 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RNF113AO15541 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF113AO15541 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF113AO15541 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RNF113AO15541 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF113AO15541 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF113AO15541 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF113AO15541 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF113AO15541 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 AC007389.4-201ENST00000454674 793 ntBASIC18.51■□□□□ 0.55
RNF113AO15541 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF113AO15541 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF113AO15541 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF113AO15541 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 AC104640.1-201ENST00000562617 2109 ntBASIC18.51■□□□□ 0.55
RNF113AO15541 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF113AO15541 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 MIR5189-201ENST00000577370 114 ntBASIC18.51■□□□□ 0.55
RNF113AO15541 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF113AO15541 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF113AO15541 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF113AO15541 MROH4P-201ENST00000431302 1578 ntBASIC18.51■□□□□ 0.55
RNF113AO15541 REXO1L4P-201ENST00000605109 1937 ntBASIC18.51■□□□□ 0.55
RNF113AO15541 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF113AO15541 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF113AO15541 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF113AO15541 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RNF113AO15541 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 AL645937.2-201ENST00000396808 931 ntBASIC18.5■□□□□ 0.55
RNF113AO15541 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF113AO15541 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF113AO15541 AC005034.1-201ENST00000426657 489 ntBASIC18.5■□□□□ 0.55
RNF113AO15541 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF113AO15541 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms