Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNRC18O15417 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNRC18O15417 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.21■□□□□ 0.19
TNRC18O15417 AP000920.1-201ENST00000531824 344 ntBASIC16.21■□□□□ 0.19
TNRC18O15417 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
TNRC18O15417 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.21■□□□□ 0.19
TNRC18O15417 AL022334.2-201ENST00000610000 484 ntBASIC16.21■□□□□ 0.19
TNRC18O15417 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.21■□□□□ 0.19
TNRC18O15417 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.21■□□□□ 0.19
TNRC18O15417 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.21■□□□□ 0.19
TNRC18O15417 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
TNRC18O15417 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TNRC18O15417 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNRC18O15417 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNRC18O15417 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNRC18O15417 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
TNRC18O15417 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.21■□□□□ 0.18
TNRC18O15417 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNRC18O15417 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.21■□□□□ 0.18
TNRC18O15417 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.2■□□□□ 0.18
TNRC18O15417 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 AC022001.3-201ENST00000606330 596 ntBASIC16.2■□□□□ 0.18
TNRC18O15417 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 AC133540.1-201ENST00000620845 1019 ntBASIC16.2■□□□□ 0.18
TNRC18O15417 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.2■□□□□ 0.18
TNRC18O15417 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TNRC18O15417 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.2■□□□□ 0.18
TNRC18O15417 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 ERP29P1-201ENST00000442902 706 ntBASIC16.2■□□□□ 0.18
TNRC18O15417 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 IGHV1-12-201ENST00000518307 205 ntBASIC16.2■□□□□ 0.18
TNRC18O15417 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.2■□□□□ 0.18
TNRC18O15417 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC16.2■□□□□ 0.18
TNRC18O15417 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TNRC18O15417 Z82244.2-201ENST00000632196 448 ntBASIC16.2■□□□□ 0.18
TNRC18O15417 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.2■□□□□ 0.18
TNRC18O15417 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNRC18O15417 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TNRC18O15417 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.19■□□□□ 0.18
TNRC18O15417 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.19■□□□□ 0.18
TNRC18O15417 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
TNRC18O15417 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.19■□□□□ 0.18
TNRC18O15417 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.19■□□□□ 0.18
TNRC18O15417 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.19■□□□□ 0.18
TNRC18O15417 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.19■□□□□ 0.18
TNRC18O15417 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.19■□□□□ 0.18
TNRC18O15417 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TNRC18O15417 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.19■□□□□ 0.18
TNRC18O15417 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.19■□□□□ 0.18
TNRC18O15417 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TNRC18O15417 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 RNA5SP406-201ENST00000516106 112 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.18■□□□□ 0.18
TNRC18O15417 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.18■□□□□ 0.18
TNRC18O15417 ACTBP9-201ENST00000587663 1099 ntBASIC16.18■□□□□ 0.18
TNRC18O15417 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.18■□□□□ 0.18
TNRC18O15417 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.18■□□□□ 0.18
TNRC18O15417 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
TNRC18O15417 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TNRC18O15417 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms