Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC136759.1-202ENST00000530858 2194 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
NDUFA1O15239 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NDUFA1O15239 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.67□□□□□ -0.7
NDUFA1O15239 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NDUFA1O15239 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.67□□□□□ -0.7
NDUFA1O15239 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 AC092474.2-201ENST00000424288 719 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 AL450487.1-201ENST00000426799 995 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 PRYP6-201ENST00000514804 343 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.67□□□□□ -0.7
NDUFA1O15239 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
NDUFA1O15239 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
NDUFA1O15239 AC073439.1-201ENST00000624121 1774 ntBASIC10.67□□□□□ -0.7
NDUFA1O15239 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NDUFA1O15239 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
NDUFA1O15239 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 BCAR1-209ENST00000546196 1340 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
NDUFA1O15239 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.66□□□□□ -0.7
NDUFA1O15239 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.66□□□□□ -0.7
NDUFA1O15239 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 MIR4313-201ENST00000580760 101 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.66□□□□□ -0.7
NDUFA1O15239 AL049840.3-201ENST00000602669 611 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 Z83851.2-201ENST00000609564 659 ntBASIC10.66□□□□□ -0.7
NDUFA1O15239 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NDUFA1O15239 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.66□□□□□ -0.7
NDUFA1O15239 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms