Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.54□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAM45BP-202ENST00000592932 1624 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SPDYE19P-201ENST00000338590 713 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC087499.6-201ENST00000411576 835 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SPDYE17-201ENST00000412399 783 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GNAQP1-201ENST00000444815 1067 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GAPDHP21-201ENST00000450301 1010 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF890P-202ENST00000530367 1156 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SPDYE22P-201ENST00000582158 798 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DFFBP1-201ENST00000433250 979 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KRT17P7-201ENST00000451704 1104 ntBASIC12.52□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms