Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SHC1P1-201ENST00000425230 1745 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 RN7SKP214-201ENST00000364208 315 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC012044.1-201ENST00000603431 297 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC073352.2-201ENST00000609385 439 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC006453.1-201ENST00000636037 1257 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL157414.3-201ENST00000624276 1954 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 E2F3P2-201ENST00000447755 1422 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP003680.1-201ENST00000598970 3660 ntBASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
LOC102724428A0A0B4J2F2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC010141.1-201ENST00000411585 623 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC019193.1-201ENST00000506678 823 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 RTN3P1-201ENST00000536295 711 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC242376.1-201ENST00000559033 726 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 DUX4L46-201ENST00000566845 751 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 MST1L-201ENST00000442552 2185 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
LOC102724428A0A0B4J2F2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 AL132994.2-201ENST00000603120 687 ntBASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
LOC102724428A0A0B4J2F2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms