Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC138969.3-201ENST00000546612 1459 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC138932.2-201ENST00000548268 1459 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC126755.4-201ENST00000549796 1459 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 DUX4L16-201ENST00000555130 1264 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NTF6A-201ENST00000591175 560 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MIR6084-201ENST00000622012 110 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC011498.7-201ENST00000624986 2027 ntBASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PAM-203ENST00000346918 3302 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 IYD-208ENST00000500320 2158 ntTSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
LINC01558Q9Y6Z2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms