Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC4Q9Y696 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC4Q9Y696 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC4Q9Y696 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 SDHAP3-202ENST00000515467 728 ntBASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 FAM45BP-202ENST00000592932 1624 ntBASIC17.71■□□□□ 0.43
CLIC4Q9Y696 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLIC4Q9Y696 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.71■□□□□ 0.42
CLIC4Q9Y696 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AL590560.3-201ENST00000623350 461 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AC079781.4-201ENST00000641908 219 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AL390755.1-201ENST00000623716 2027 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AC100757.3-201ENST00000622361 1406 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLIC4Q9Y696 AL009178.2-201ENST00000597278 2719 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 CICP14-201ENST00000629111 2732 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.7■□□□□ 0.42
CLIC4Q9Y696 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms