Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AC008132.1-202ENST00000342005 1389 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 DPM3-202ENST00000368399 517 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 MIR33B-201ENST00000385104 96 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AL136309.1-201ENST00000403917 691 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AC024681.1-201ENST00000521917 487 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 MIR3907-201ENST00000579424 151 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 RN7SL574P-201ENST00000581512 297 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AL603764.1-201ENST00000636452 321 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AL645728.2-202ENST00000641679 227 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 MTHFR-217ENST00000641820 1569 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LINC02447-202ENST00000501888 2146 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LTB4R2-202ENST00000528054 3092 ntBASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCFC2Q9Y5Z7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC011742.3-201ENST00000439053 820 ntBASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 AC100757.4-201ENST00000626934 759 ntBASIC16.02■□□□□ 0.16
HCFC2Q9Y5Z7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 AC055811.4-201ENST00000624039 1754 ntBASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
HCFC2Q9Y5Z7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AL139384.1-201ENST00000612143 3047 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms