Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 RPL5P21-201ENST00000404620 815 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 AC087499.6-201ENST00000411576 835 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 GAPDHP40-201ENST00000505218 1006 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 DRD5P1-201ENST00000456605 1438 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 AL359258.3-201ENST00000622910 2331 ntBASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.37□□□□□ -0.11
DTX4Q9Y2E6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AC126365.1-201ENST00000578585 1514 ntBASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AC104581.4-201ENST00000623126 3052 ntBASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 TP53TG3HP-202ENST00000569755 579 ntBASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AC107373.2-201ENST00000607735 490 ntBASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DTX4Q9Y2E6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC023157.3-201ENST00000619086 2088 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms