Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 AC105917.1-201ENST00000506637 2539 ntBASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSX2IPQ9Y2D8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AC134407.2-201ENST00000625089 1978 ntBASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 VDAC1P7-201ENST00000462417 847 ntBASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 REXO1L6P-201ENST00000603433 1515 ntBASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
SSX2IPQ9Y2D8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 TUBB1P2-201ENST00000422712 1306 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 TUBB1P1-201ENST00000503144 1300 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC068418.2-201ENST00000577309 3703 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 ACKR1-201ENST00000368121 1240 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 MIR648-201ENST00000385046 94 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC016694.1-201ENST00000434179 700 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AC007551.1-201ENST00000457394 519 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 FAM8A2P-201ENST00000528813 1142 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AP000812.2-201ENST00000538934 718 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 AL583810.1-201ENST00000553344 1045 ntBASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SSX2IPQ9Y2D8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms