Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB4Q9UN71 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AL355306.1-201ENST00000415580 579 ntBASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AC061975.2-201ENST00000581722 295 ntBASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AC091812.2-201ENST00000619081 385 ntBASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AC092127.1-201ENST00000567093 3455 ntBASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB4Q9UN71 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AC009090.5-201ENST00000624886 2285 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AC004987.2-201ENST00000395959 1148 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 FAM58CP-201ENST00000435741 640 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SPDYE11-202ENST00000450699 704 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 IGHV3-62-201ENST00000520057 340 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SPDYE9P-201ENST00000570642 692 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SPDYE10P-202ENST00000612005 668 ntBASIC15.13■□□□□ 0.01
PCDHGB4Q9UN71 SPDYE8P-202ENST00000612377 668 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms