Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNTN3Q9P232 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AC007551.1-201ENST00000457394 519 ntBASIC16.61■□□□□ 0.25
CNTN3Q9P232 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AP000812.2-201ENST00000538934 718 ntBASIC16.61■□□□□ 0.25
CNTN3Q9P232 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNTN3Q9P232 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNTN3Q9P232 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AL158070.2-201ENST00000623713 1621 ntBASIC16.6■□□□□ 0.25
CNTN3Q9P232 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC016694.1-201ENST00000434179 700 ntBASIC16.6■□□□□ 0.25
CNTN3Q9P232 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 RPL7P3-201ENST00000441388 714 ntBASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 KLF2P4-201ENST00000451959 1225 ntBASIC16.6■□□□□ 0.25
CNTN3Q9P232 CTBP2P5-201ENST00000454986 1264 ntBASIC16.6■□□□□ 0.25
CNTN3Q9P232 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTN3Q9P232 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTN3Q9P232 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 AC148477.4-201ENST00000613430 1793 ntBASIC16.59■□□□□ 0.25
CNTN3Q9P232 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTN3Q9P232 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNTN3Q9P232 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms