Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 RBPMS2P1-201ENST00000437762 623 ntBASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 CICP23-201ENST00000605013 2741 ntBASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LIN7CQ9NUP9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 RNA5SP410-201ENST00000516285 106 ntBASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ALG1L8P-201ENST00000533887 760 ntBASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 FOXO1B-201ENST00000504678 1527 ntBASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.97□□□□□ -0.33
LIN7CQ9NUP9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AC106881.1-201ENST00000605849 3329 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms