Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.36■□□□□ 0.21
TLR9Q9NR96 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 EIF4HP1-201ENST00000453115 687 ntBASIC16.36■□□□□ 0.21
TLR9Q9NR96 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AC244157.2-201ENST00000616239 1006 ntBASIC16.36■□□□□ 0.21
TLR9Q9NR96 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AC138627.1-207ENST00000641560 1006 ntBASIC16.36■□□□□ 0.21
TLR9Q9NR96 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TLR9Q9NR96 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TLR9Q9NR96 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 FAM8A4P-201ENST00000435433 1213 ntBASIC16.35■□□□□ 0.21
TLR9Q9NR96 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 MIR4722-201ENST00000578292 60 ntBASIC16.35■□□□□ 0.21
TLR9Q9NR96 MIR3619-201ENST00000579667 83 ntBASIC16.35■□□□□ 0.21
TLR9Q9NR96 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.35■□□□□ 0.21
TLR9Q9NR96 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TLR9Q9NR96 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 AL139094.1-201ENST00000405549 1188 ntBASIC16.34■□□□□ 0.21
TLR9Q9NR96 AC253536.4-201ENST00000440539 267 ntBASIC16.34■□□□□ 0.21
TLR9Q9NR96 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TLR9Q9NR96 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.34■□□□□ 0.21
TLR9Q9NR96 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.34■□□□□ 0.21
TLR9Q9NR96 AC007663.3-201ENST00000609632 465 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms