Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 OR8S1-201ENST00000310194 1080 ntBASIC16.41■□□□□ 0.22
CD248Q9HCU0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 DFFBP1-201ENST00000433250 979 ntBASIC16.41■□□□□ 0.22
CD248Q9HCU0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.41■□□□□ 0.22
CD248Q9HCU0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CD248Q9HCU0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 DGCR5-201ENST00000399539 862 ntBASIC16.4■□□□□ 0.22
CD248Q9HCU0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.4■□□□□ 0.22
CD248Q9HCU0 AL033527.5-202ENST00000641632 1098 ntBASIC16.4■□□□□ 0.22
CD248Q9HCU0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.4■□□□□ 0.22
CD248Q9HCU0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD248Q9HCU0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.4■□□□□ 0.22
CD248Q9HCU0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.39■□□□□ 0.22
CD248Q9HCU0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
CD248Q9HCU0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD248Q9HCU0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms