Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ZBED1P1-201ENST00000502364 1930 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CICP14-201ENST00000629111 2732 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AF238378.1-201ENST00000526806 358 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AC105339.3-201ENST00000560043 636 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 PRELID1P1-202ENST00000567272 903 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AC006504.5-208ENST00000588784 2401 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AL589702.1-201ENST00000641229 1509 ntBASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
SND1-IT1Q9HBX3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AC079781.5-202ENST00000641784 3743 ntBASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AKR1C7P-201ENST00000305623 895 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms