Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 AC021723.1-201ENST00000486306 515 ntBASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 NUP210P1-202ENST00000504322 710 ntBASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 MIR5572-201ENST00000583188 137 ntBASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 AC004923.1-202ENST00000642106 209 ntBASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 LINC02199-201ENST00000506655 2702 ntBASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTFDC1Q9BY42 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AP000593.2-201ENST00000542775 1433 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 LDHBP1-201ENST00000455730 1119 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 TUBB8P8-201ENST00000458717 1058 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 MARK2P5-201ENST00000507649 634 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 PRKXP1-201ENST00000561423 1122 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AL162426.1-201ENST00000624141 743 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 AC055811.4-201ENST00000624039 1754 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTFDC1Q9BY42 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 RNMTL1P1-201ENST00000454103 560 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AC106794.1-201ENST00000506935 792 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 RN7SL163P-201ENST00000583100 276 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 U62317.3-201ENST00000608319 855 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AC018635.2-201ENST00000608625 364 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 AC068587.8-201ENST00000641239 219 ntBASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTFDC1Q9BY42 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms