Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 SPDYE19P-201ENST00000338590 713 ntBASIC10.89□□□□□ -0.67
UPK3BQ9BT76 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AZGP1P1-201ENST00000411909 902 ntBASIC10.89□□□□□ -0.67
UPK3BQ9BT76 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TP53TG3HP-202ENST00000569755 579 ntBASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 EDF1-203ENST00000371649 790 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC136604.1-201ENST00000418535 575 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 PHKG1P2-201ENST00000457537 863 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 MEIS3P1-201ENST00000495167 958 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 API5-211ENST00000534695 560 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TPRX2P-201ENST00000535362 881 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC005225.4-201ENST00000557330 545 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AL450472.2-201ENST00000603663 1156 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 AC025048.6-201ENST00000634326 1161 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 MYO15B-237ENST00000642007 4893 ntBASIC10.88□□□□□ -0.67
UPK3BQ9BT76 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.88□□□□□ -0.67
UPK3BQ9BT76 PCDHA3-202ENST00000532566 4594 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms