Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 RNU1-129P-201ENST00000384064 167 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 POM121L3P-201ENST00000419331 1163 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 GPX1P2-201ENST00000429271 606 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AC139887.3-201ENST00000568585 713 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 U1.21-201ENST00000580816 167 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AP001269.4-201ENST00000609611 512 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AC004706.3-202ENST00000621574 984 ntBASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SEC22CQ9BRL7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 TOB2P1-201ENST00000469761 992 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AL121672.3-201ENST00000608644 468 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC006011.2-201ENST00000621313 1158 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AL805961.1-202ENST00000641562 540 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC105206.1-202ENST00000314927 2368 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 AC016734.2-201ENST00000624325 1377 ntBASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SEC22CQ9BRL7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms