Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AC104109.2-201ENST00000602919 1418 ntBASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 COL6A4P2-202ENST00000504443 2753 ntBASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CMSS1Q9BQ75 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 RPS8P6-201ENST00000426177 609 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AL450487.1-201ENST00000426799 995 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AC007967.2-201ENST00000432613 625 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 PDPK2P-202ENST00000562415 1191 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AP002472.1-201ENST00000577490 586 ntBASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.36□□□□□ -0.27
CMSS1Q9BQ75 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 KRT18P2-201ENST00000447938 1258 ntBASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.35□□□□□ -0.27
CMSS1Q9BQ75 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms