Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 MTDHP5-201ENST00000598980 586 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV9Q99603 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV9Q99603 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV9Q99603 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV9Q99603 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 AL035456.1-201ENST00000456064 1369 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 KRT8P12-202ENST00000472924 1397 ntBASIC12.14□□□□□ -0.47
TRGV9Q99603 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRGV9Q99603 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV9Q99603 AC026748.1-201ENST00000624349 3251 ntBASIC12.13□□□□□ -0.47
TRGV9Q99603 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 KRT18P32-201ENST00000424695 1287 ntBASIC12.13□□□□□ -0.47
TRGV9Q99603 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.13□□□□□ -0.47
TRGV9Q99603 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.13□□□□□ -0.47
TRGV9Q99603 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRGV9Q99603 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.13□□□□□ -0.47
TRGV9Q99603 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRGV9Q99603 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV9Q99603 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV9Q99603 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRGV9Q99603 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV9Q99603 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRGV9Q99603 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV9Q99603 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.12□□□□□ -0.47
TRGV9Q99603 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.12□□□□□ -0.47
TRGV9Q99603 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRGV9Q99603 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRGV9Q99603 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV9Q99603 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV9Q99603 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV9Q99603 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV9Q99603 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms