Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP2Q96SN8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDK5RAP2Q96SN8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.88■□□□□ 0.45
CDK5RAP2Q96SN8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 TLE1P1-201ENST00000422965 589 ntBASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 AC013268.4-201ENST00000637413 2228 ntBASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CDK5RAP2Q96SN8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AL022328.3-201ENST00000607943 679 ntBASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AC091271.1-201ENST00000611877 1162 ntBASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 CHMP4BP1-201ENST00000556017 588 ntBASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AL160314.3-201ENST00000556041 767 ntBASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 NDUFV2P1-201ENST00000596415 907 ntBASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.86■□□□□ 0.45
CDK5RAP2Q96SN8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms