Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 CHCHD2P8-201ENST00000429873 447 ntBASIC14.68□□□□□ -0.06
NR1H4Q96RI1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AC009533.2-201ENST00000543664 586 ntBASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
NR1H4Q96RI1 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.68□□□□□ -0.06
NR1H4Q96RI1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 MINOS1P3-201ENST00000457048 203 ntBASIC14.67□□□□□ -0.06
NR1H4Q96RI1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TMEM198B-204ENST00000484016 896 ntBASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AL121956.5-201ENST00000625261 221 ntBASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 AC016734.2-201ENST00000624325 1377 ntBASIC14.67□□□□□ -0.06
NR1H4Q96RI1 MIR193BHG-211ENST00000641433 5365 ntBASIC14.67□□□□□ -0.06
NR1H4Q96RI1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NR1H4Q96RI1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 PEG13-201ENST00000631594 5667 ntBASIC14.66□□□□□ -0.06
NR1H4Q96RI1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H4Q96RI1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms