Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.42■□□□□ 0.22
GCNAQ96QF7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GCNAQ96QF7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AL365203.3-201ENST00000609742 2057 ntBASIC16.41■□□□□ 0.22
GCNAQ96QF7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AC068587.3-201ENST00000526613 355 ntBASIC16.41■□□□□ 0.22
GCNAQ96QF7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AC104640.1-201ENST00000562617 2109 ntBASIC16.41■□□□□ 0.22
GCNAQ96QF7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AC000095.1-201ENST00000603208 874 ntBASIC16.41■□□□□ 0.22
GCNAQ96QF7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GCNAQ96QF7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GCNAQ96QF7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 CROCCP4-201ENST00000457096 498 ntBASIC16.4■□□□□ 0.22
GCNAQ96QF7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 COX11-210ENST00000639671 696 ntBASIC16.4■□□□□ 0.22
GCNAQ96QF7 AC092384.3-202ENST00000564646 2873 ntBASIC16.4■□□□□ 0.22
GCNAQ96QF7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCNAQ96QF7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GCNAQ96QF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms