Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 KRT8P22-201ENST00000562317 1415 ntBASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CHCHD1Q96BP2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC073548.1-201ENST00000624088 1882 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 PRYP5-201ENST00000451909 266 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC107918.2-201ENST00000530817 355 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AL139385.1-201ENST00000611744 3272 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC138969.3-201ENST00000546612 1459 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC138932.2-201ENST00000548268 1459 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC126755.4-201ENST00000549796 1459 ntBASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CHCHD1Q96BP2 AC118758.2-201ENST00000614242 2813 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AC018892.3-201ENST00000623986 2499 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms