Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AC105250.1-201ENST00000509378 2057 ntBASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 MIR1908-201ENST00000410394 80 ntBASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AC106760.1-201ENST00000508690 800 ntBASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0A1Q93050 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 BRWD1P1-201ENST00000401091 371 ntBASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AL355994.2-201ENST00000447882 704 ntBASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 FAM8A2P-201ENST00000528813 1142 ntBASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AL138799.1-201ENST00000448213 1675 ntBASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A1Q93050 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 TUBB1P2-201ENST00000422712 1306 ntBASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 TUBB1P1-201ENST00000503144 1300 ntBASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 ACKR1-201ENST00000368121 1240 ntBASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP6V0A1Q93050 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms