Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
HPS1Q92902 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.36□□□□□ -0.11
HPS1Q92902 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.36□□□□□ -0.11
HPS1Q92902 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
HPS1Q92902 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.36□□□□□ -0.11
HPS1Q92902 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 AC027796.2-201ENST00000575326 344 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 AC023141.13-201ENST00000604991 943 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 AL355385.1-201ENST00000606123 409 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 AL513190.1-201ENST00000621254 727 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 AC004877.2-201ENST00000623941 599 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 ELL2P1-201ENST00000413990 1906 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HPS1Q92902 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HPS1Q92902 FRMD8P1-201ENST00000440433 1524 ntBASIC14.36□□□□□ -0.11
HPS1Q92902 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
HPS1Q92902 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 AL671710.1-201ENST00000610245 2349 ntBASIC14.35□□□□□ -0.11
HPS1Q92902 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HPS1Q92902 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 IGLL3P-201ENST00000412472 434 ntBASIC14.35□□□□□ -0.11
HPS1Q92902 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 EIF2S2P5-201ENST00000457635 968 ntBASIC14.35□□□□□ -0.11
HPS1Q92902 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
HPS1Q92902 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 AL596442.2-201ENST00000610240 980 ntBASIC14.35□□□□□ -0.11
HPS1Q92902 AC010507.1-201ENST00000633895 436 ntBASIC14.35□□□□□ -0.11
HPS1Q92902 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
HPS1Q92902 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms