Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 CHMP1AP1-201ENST00000445563 662 ntBASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 AC005730.2-201ENST00000564549 1184 ntBASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 AC055811.4-201ENST00000624039 1754 ntBASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAPGEF4Q8WZA2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 CYP46A4P-201ENST00000414953 267 ntBASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 AC016629.1-201ENST00000596579 586 ntBASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.11■□□□□ 0.81
RAPGEF4Q8WZA2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 MIR769-201ENST00000390225 118 ntBASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AL354877.1-201ENST00000424412 413 ntBASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AC100850.1-201ENST00000506768 649 ntBASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CHMP4BP1-201ENST00000556017 588 ntBASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPGEF4Q8WZA2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPGEF4Q8WZA2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms