Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 HLA-J-204ENST00000495278 958 ntBASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC026434.2-201ENST00000506094 1078 ntBASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC009779.1-201ENST00000551138 283 ntBASIC18.53■□□□□ 0.56
SNED1Q8TER0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AL132994.2-201ENST00000603120 687 ntBASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC138696.2-201ENST00000607376 223 ntBASIC18.53■□□□□ 0.56
SNED1Q8TER0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.53■□□□□ 0.56
SNED1Q8TER0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNED1Q8TER0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 AC006335.1-201ENST00000445200 547 ntBASIC18.52■□□□□ 0.56
SNED1Q8TER0 FGFR3P1-201ENST00000449999 601 ntBASIC18.52■□□□□ 0.56
SNED1Q8TER0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.52■□□□□ 0.56
SNED1Q8TER0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 RN7SL163P-201ENST00000583100 276 ntBASIC18.52■□□□□ 0.56
SNED1Q8TER0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 AC011491.1-203ENST00000637688 543 ntBASIC18.52■□□□□ 0.56
SNED1Q8TER0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNED1Q8TER0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SNED1Q8TER0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNED1Q8TER0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNED1Q8TER0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SNED1Q8TER0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
SNED1Q8TER0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.52■□□□□ 0.55
SNED1Q8TER0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNED1Q8TER0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SNED1Q8TER0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNED1Q8TER0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 PUDPP3-201ENST00000445368 636 ntBASIC18.51■□□□□ 0.55
SNED1Q8TER0 AC073150.1-201ENST00000450406 1084 ntBASIC18.51■□□□□ 0.55
SNED1Q8TER0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNED1Q8TER0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNED1Q8TER0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms