Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 AC007064.4-201ENST00000637740 555 ntBASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB3IL1Q8TBN0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 HCG4B-203ENST00000450128 991 ntBASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 PHKG1P2-201ENST00000457537 863 ntBASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 AL662844.1-201ENST00000546340 181 ntBASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 AC023141.13-201ENST00000604991 943 ntBASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RAB3IL1Q8TBN0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 AC140479.7-201ENST00000636301 2332 ntBASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 CRYGEP-201ENST00000412192 528 ntBASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 AF186996.4-201ENST00000467186 377 ntBASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 AC010507.1-201ENST00000633895 436 ntBASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms