Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCNYL1Q8N7R7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 RARRES2P9-201ENST00000565168 469 ntBASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCNYL1Q8N7R7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ZBED1P1-201ENST00000502364 1930 ntBASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 AC069335.1-201ENST00000489972 472 ntBASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.39■□□□□ 0.05
CCNYL1Q8N7R7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms