Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 AC126177.1-201ENST00000547829 2218 ntBASIC23.89■■□□□ 1.41
VPS8Q8N3P4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 MIR1202-201ENST00000408529 83 ntBASIC23.88■■□□□ 1.41
VPS8Q8N3P4 MESTP3-201ENST00000503460 968 ntBASIC23.88■■□□□ 1.41
VPS8Q8N3P4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
VPS8Q8N3P4 AC091951.1-201ENST00000512854 2465 ntBASIC23.88■■□□□ 1.41
VPS8Q8N3P4 TUBB1P2-201ENST00000422712 1306 ntBASIC23.87■■□□□ 1.41
VPS8Q8N3P4 TUBB1P1-201ENST00000503144 1300 ntBASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 AC138696.2-201ENST00000607376 223 ntBASIC23.87■■□□□ 1.41
VPS8Q8N3P4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 AC023090.2-201ENST00000625182 2110 ntBASIC23.87■■□□□ 1.41
VPS8Q8N3P4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS8Q8N3P4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AL354989.2-201ENST00000435838 1540 ntBASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 YBX1P6-201ENST00000442962 1002 ntBASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AL355994.2-201ENST00000447882 704 ntBASIC23.86■■□□□ 1.41
VPS8Q8N3P4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AHCYP2-201ENST00000430630 1300 ntBASIC23.86■■□□□ 1.41
VPS8Q8N3P4 AC104640.1-201ENST00000562617 2109 ntBASIC23.86■■□□□ 1.41
VPS8Q8N3P4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS8Q8N3P4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 RN7SKP230-201ENST00000365642 335 ntBASIC23.85■■□□□ 1.41
VPS8Q8N3P4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS8Q8N3P4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms