Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.47□□□□□ -0.09
BEST3Q8N1M1 KRT8P22-201ENST00000562317 1415 ntBASIC14.47□□□□□ -0.09
BEST3Q8N1M1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BEST3Q8N1M1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AC092384.3-202ENST00000564646 2873 ntBASIC14.46□□□□□ -0.09
BEST3Q8N1M1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AL162726.2-201ENST00000438986 1017 ntBASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AC106886.1-201ENST00000568660 600 ntBASIC14.46□□□□□ -0.09
BEST3Q8N1M1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AL049840.4-201ENST00000602422 811 ntBASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.46□□□□□ -0.09
BEST3Q8N1M1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 INTS4P2-202ENST00000614726 2019 ntBASIC14.46□□□□□ -0.1
BEST3Q8N1M1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 AL121723.1-201ENST00000445194 1519 ntBASIC14.46□□□□□ -0.1
BEST3Q8N1M1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.46□□□□□ -0.1
BEST3Q8N1M1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC134915.1-201ENST00000426461 574 ntBASIC14.45□□□□□ -0.1
BEST3Q8N1M1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC007274.1-201ENST00000439805 662 ntBASIC14.45□□□□□ -0.1
BEST3Q8N1M1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 KRT18P43-201ENST00000469825 1281 ntBASIC14.45□□□□□ -0.1
BEST3Q8N1M1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.45□□□□□ -0.1
BEST3Q8N1M1 RPL13AP25-201ENST00000484130 612 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms